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in qtractor, you do just that via (menu) Track/Export Tracks/Audio...

it renders the whole audio mix-down, over the selected output audio buses, from all audio _and_ MIDI tracks, as long those MIDI tracks have some (MIDI) instrument plugins excited and pumping their business out (as audio of course!).

all that is to say, that any external MIDI instruments are not included on that export process--for that, you better get to bounce (realtime recording) their output signal, back into some qtractor audio tracks, as a rule.

hth.
cheers